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  5. Tin_g32428

Tin_g32428 (EMB2758)


Aliases : EMB2758

Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g32428

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00235510 OTP84,... Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
AMTR_s00039p00130050 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
AMTR_s00071p00184210 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AMTR_s03531p00004900 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g02330,... 0.03 OrthoFinder output from all 47 species
AT4G33170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G39680 EMB2744 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g002045 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g002735 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g003796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g003802 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g010912 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g022884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036766 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g065086 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g066461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066608 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g074695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g115360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07321 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g25067 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g44555 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05671 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g05891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18055 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26561 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32799 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23203 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27916 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02406.t1 Aspi01Gene02406 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47938.t1 CRR22, Aspi01Gene47938 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0257.g060572 No alias not classified & original description: CDS=1-2448 0.04 OrthoFinder output from all 47 species
Cba_g05972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07770 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14919 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20859 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g74755 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G062800.1 Ceric.06G062800 not classified & original description: pacid=50620833... 0.03 OrthoFinder output from all 47 species
Ceric.07G024400.1 Ceric.07G024400 not classified & original description: pacid=50626298... 0.03 OrthoFinder output from all 47 species
Ceric.35G063700.1 Ceric.35G063700 not classified & original description: pacid=50581590... 0.03 OrthoFinder output from all 47 species
Dac_g05109 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14700 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g16073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18973 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30435 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35674 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37184 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g45650 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g21324 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36065 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28824 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g47657 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g49826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26697 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000072001 No alias Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species
GSVIVT01003453001 OTP80 RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
GSVIVT01007811001 No alias Pentatricopeptide repeat-containing protein At3g22690... 0.03 OrthoFinder output from all 47 species
GSVIVT01010654001 No alias Pentatricopeptide repeat-containing protein At4g38010... 0.03 OrthoFinder output from all 47 species
GSVIVT01015521001 No alias Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species
GSVIVT01017075001 OTP82 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
GSVIVT01024915001 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.03 OrthoFinder output from all 47 species
GSVIVT01028697001 EMB2261 Pentatricopeptide repeat-containing protein At3g49170,... 0.03 OrthoFinder output from all 47 species
GSVIVT01033837001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01035837001 LPA66 Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
GSVIVT01038381001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_19040 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os09g07780.1 OTP84, LOC_Os09g07780 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Len_g02423 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18952 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g03987 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05475 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07429 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12447 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19289 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25656 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_38395g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_385322g0010 OTP82 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
MA_53781g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_863836g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_9354530g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_961981g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
Msp_g14913 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g16027 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g04708 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14064 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g05568 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g15833 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g61524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63295 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63396 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20514 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g14462 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15313 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30421 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007750 No alias not classified & original description: CDS=1-1920 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008203 OTP86 not classified & original description: CDS=1-2439 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0060.g015229 VAC1, ECB2, ATECB2 not classified & original description: CDS=1-1704 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0132.g022201 No alias not classified & original description: CDS=265-2808 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0170.g024361 OTP84 cyclin-dependent kinase inhibitor *(KRP/ICK) & original... 0.03 OrthoFinder output from all 47 species
Sam_g06265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo74762 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
Smo92610 No alias Pentatricopeptide repeat-containing protein At5g56310... 0.04 OrthoFinder output from all 47 species
Solyc01g007850.2.1 Solyc01g007850 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc01g091610.1.1 Solyc01g091610 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Solyc02g014360.3.1 LOI1, MEF11,... RNA editing factor (MEF11) 0.03 OrthoFinder output from all 47 species
Solyc02g065410.3.1 CRR22, Solyc02g065410 Pentatricopeptide repeat-containing protein At1g20230... 0.06 OrthoFinder output from all 47 species
Solyc03g063690.1.1 MEF1, Solyc03g063690 RNA editing factor (MEF1) 0.04 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
Solyc09g010070.1.1 EMB2758, Solyc09g010070 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Solyc10g005090.3.1 Solyc10g005090 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc11g040060.3.1 EMB2758, Solyc11g040060 Pentatricopeptide repeat-containing protein At4g33990... 0.05 OrthoFinder output from all 47 species
Spa_g01903 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g23159 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g48473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05234 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08628 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09422 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g11480 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22747 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26731 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27280 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28457 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007600_P001 Zm00001e007600 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e008200_P001 Zm00001e008200 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Zm00001e010837_P001 LPA66, Zm00001e010837 Pentatricopeptide repeat-containing protein At5g48910... 0.02 OrthoFinder output from all 47 species
Zm00001e018565_P001 Zm00001e018565 Pentatricopeptide repeat-containing protein At3g13880... 0.03 OrthoFinder output from all 47 species
Zm00001e019482_P001 Zm00001e019482 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
Zm00001e037600_P001 Zm00001e037600 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR032867 DYW_dom 16 101
No external refs found!