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  5. Tin_g33504

Tin_g33504


Description : not classified & original description: none


Gene families : OG0000118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g33504
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
Als_g44161 ATHMG, HMG, SSRP1, NFD not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g60447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g36732 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g54903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37796 NFD4, HMGB4, NFD04 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g21733 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species
Lfl_g24838 ATHMG, HMG, SSRP1, NFD not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g52636 HMGB5, NFD5, NFD05, HMGD not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g23676 NFD2, HMG BETA... not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 44 107
No external refs found!