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  5. Tin_g37385

Tin_g37385 (RPS8)


Aliases : RPS8

Description : component *(uS8c) of small plastid ribosomal-subunit proteome & original description: none


Gene families : OG0009333 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009333_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g37385
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
ATCG00770 RPS8 ribosomal protein S8 0.09 OrthoFinder output from all 47 species
Aev_g03624 RPS8 component *(uS8c) of small plastid ribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Ceric.05G042100.1 RPS8, Ceric.05G042100 component *(uS8c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ceric.05G049100.1 RPS8, Ceric.05G049100 component *(uS8c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Ceric.29G004100.1 RPS8, Ceric.29G004100 component *(uS8c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ceric.38G008900.1 RPS8, Ceric.38G008900 component *(uS8c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species
Ehy_g00053 RPS8 component *(uS8c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os04g16832.1 RPS8, LOC_Os04g16832 component psRPS8 of small ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
LOC_Os05g22718.1 RPS8, LOC_Os05g22718 component psRPS8 of small ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
LOC_Os08g15278.1 RPS8, LOC_Os08g15278 component psRPS8 of small ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
Mpzg00740.1 RPS8 component psRPS8 of small ribosomal subunit proteome 0.03 OrthoFinder output from all 47 species
Nbi_g03453 RPS8 component *(uS8c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Pir_g10782 RPS8 component *(uS8c) of small plastid ribosomal-subunit... 0.21 OrthoFinder output from all 47 species
Sacu_v1.1_s0150.g023358 RPS8 not classified & original description: CDS=1-339 0.03 OrthoFinder output from all 47 species
Solyc00g500031.1.1 RPS8, Solyc00g500031 component psRPL14 of large ribosomal subunit proteome.... 0.04 OrthoFinder output from all 47 species
Solyc00g500076.1.1 RPS8, Solyc00g500076 component psRPL14 of large ribosomal subunit proteome.... 0.04 OrthoFinder output from all 47 species
Spa_g00741 RPS8 component *(uS8c) of small plastid ribosomal-subunit... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR000630 Ribosomal_S8 4 128
No external refs found!