Description : C2H2 subclass ZFP transcription factor & original description: none
Gene families : OG0000096 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000096_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Tin_g37470 | |
| Cluster | HCCA: Cluster_116 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00124p00105750 | KNU,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g04158 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g38400 | GIS2 | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g23450.1 | LOC_Os07g23450 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g23477 | ATZFP2, ZFP2 | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g32874 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g38006 | No alias | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g47303 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g084910.3.1 | TAC1, Solyc10g084910 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g41345 | SUP, FLO10, FON1 | C2H2 subclass ZFP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003729 | mRNA binding | IEP | HCCA |
| CC | GO:0005685 | U1 snRNP | IEP | HCCA |
| BP | GO:0006376 | mRNA splice site selection | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
| CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
