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  5. Tin_g39500

Tin_g39500


Description : RING-H2-class ATL-subclass E3 ubiquiTin ligase & original description: none


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g39500
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
Adi_g057600 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01262 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dac_g01390 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dcu_g40181 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_9521306g0010 ATL2, TL2 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Msp_g39033 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ppi_g00620 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25396 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Spa_g39129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e011901_P001 Zm00001e011901 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e023515_P001 Zm00001e023515 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e032838_P001 Zm00001e032838 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 100 143
No external refs found!