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  5. Tin_g39649

Tin_g39649 (NFD2, HMG BETA 1, HMGB2, NFD02)


Aliases : NFD2, HMG BETA 1, HMGB2, NFD02

Description : DNA bending architectural protein *(HMG-B) & original description: none


Gene families : OG0000118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000118_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g39649

Target Alias Description ECC score Gene Family Method Actions
Ceric.03G048600.1 NFD2, HMG BETA... not classified & original description: pacid=50572457... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000655.17 No alias No description available 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020902.35 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g20176 NFD2, HMG BETA... DNA bending architectural protein *(HMG-B) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012915 NFD03, HMGB3, NFD3 DNA bending architectural protein *(HMG-B) & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009116 nucleoside metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR009071 HMG_box_dom 85 154
No external refs found!