Aliases : CRR22
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00061p00127300 | MEF22,... | Pentatricopeptide repeat-containing protein At3g12770... | 0.03 | OrthoFinder output from all 47 species | |
| AT2G03380 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G33990 | EMB2758 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g13433 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g37012 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g03728 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g54909 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g58397 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g28230 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g36669 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g02588 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g03827 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g05729 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g16003 | OTP86 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g20686 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23672 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g23791 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g26165 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g26806 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g26873 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g28530 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g33090 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g33107 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g33237 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g40212 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g59647 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g11729 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g27620 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g36659 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g67693 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G121800.1 | Ceric.01G121800 | not classified & original description: pacid=50593016... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.17G074800.1 | Ceric.17G074800 | not classified & original description: pacid=50618293... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.23G020600.1 | Ceric.23G020600 | not classified & original description: pacid=50609730... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.29G017900.1 | Ceric.29G017900 | not classified & original description: pacid=50624370... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g06472 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g05747 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g05782 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g06799 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07766 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g07768 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08229 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08274 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16544 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g16673 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16791 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g17302 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g23963 | OTP82 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g26819 | OTP82 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g36025 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g36645 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g37120 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g37317 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g38473 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g44847 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g47766 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01031733001 | EMB2758 | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g63260.3 | LOC_Os03g63260 | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g15460.1 | LOC_Os12g15460 | Pentatricopeptide repeat-containing protein At1g18485... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g33779 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g54965 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g32854 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g24627 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g28213 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g34200 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g19044 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g43973 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01995 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g03074 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g09788 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12795 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13017 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57349 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g58717 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63645 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g63869 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g03497 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g15455 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g05273 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06450 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06840 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g07606 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g29087 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g36024 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g53191 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g55034 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g55534 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g56908 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g13569 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo107423 | No alias | Pentatricopeptide repeat-containing protein At2g34400... | 0.03 | OrthoFinder output from all 47 species | |
| Smo99756 | No alias | Pentatricopeptide repeat-containing protein At2g39620... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g013200.1.1 | OTP85, Solyc05g013200 | RNA editing factor (OTP85) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g04723 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g09360 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g18959 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g22005 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g25057 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g25906 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g21831 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000381 | regulation of alternative mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0004019 | adenylosuccinate synthase activity | IEP | HCCA |
| CC | GO:0005744 | TIM23 mitochondrial import inner membrane translocase complex | IEP | HCCA |
| BP | GO:0006163 | purine nucleotide metabolic process | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006839 | mitochondrial transport | IEP | HCCA |
| BP | GO:0006886 | intracellular protein transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0016840 | carbon-nitrogen lyase activity | IEP | HCCA |
| MF | GO:0016843 | amine-lyase activity | IEP | HCCA |
| MF | GO:0016844 | strictosidine synthase activity | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| BP | GO:0030150 | protein import into mitochondrial matrix | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| BP | GO:0043484 | regulation of RNA splicing | IEP | HCCA |
| BP | GO:0044743 | protein transmembrane import into intracellular organelle | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0046907 | intracellular transport | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0048024 | regulation of mRNA splicing, via spliceosome | IEP | HCCA |
| BP | GO:0050684 | regulation of mRNA processing | IEP | HCCA |
| BP | GO:0051649 | establishment of localization in cell | IEP | HCCA |
| BP | GO:0065002 | intracellular protein transmembrane transport | IEP | HCCA |
| BP | GO:0070585 | protein localization to mitochondrion | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071806 | protein transmembrane transport | IEP | HCCA |
| BP | GO:0072521 | purine-containing compound metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0072655 | establishment of protein localization to mitochondrion | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1903311 | regulation of mRNA metabolic process | IEP | HCCA |
| BP | GO:1990542 | mitochondrial transmembrane transport | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 195 | 243 |
| IPR002885 | Pentatricopeptide_repeat | 298 | 343 |
| IPR002885 | Pentatricopeptide_repeat | 371 | 396 |
| IPR002885 | Pentatricopeptide_repeat | 401 | 429 |
| IPR002885 | Pentatricopeptide_repeat | 472 | 496 |
| IPR002885 | Pentatricopeptide_repeat | 170 | 192 |
| IPR002885 | Pentatricopeptide_repeat | 96 | 123 |
| No external refs found! |
