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  5. Tin_g39928

Tin_g39928


Description : component *(uL1) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0001297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001297_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g39928

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00167280 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
AT1G08360 No alias Ribosomal protein L1p/L10e family 0.03 OrthoFinder output from all 47 species
AT2G27530 PGY1 Ribosomal protein L1p/L10e family 0.03 OrthoFinder output from all 47 species
Ala_g18263 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g02409 PGY1 component *(uL1) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cba_g66373 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020697.31 No alias 60S ribosomal protein L10a OS=Oryza sativa subsp. japonica 0.04 OrthoFinder output from all 47 species
Cre02.g101350 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Dac_g03072 PGY1 component *(uL1) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Dac_g25407 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
GSVIVT01033841001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Gb_13744 No alias component RPL10a of LSU proteome component 0.04 OrthoFinder output from all 47 species
Gb_28506 No alias component RPL10a of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os02g21660.1 LOC_Os02g21660 component RPL10a of LSU proteome component 0.04 OrthoFinder output from all 47 species
MA_71921g0010 No alias component RPL10a of LSU proteome component 0.03 OrthoFinder output from all 47 species
Mp3g07870.1 No alias component RPL10a of LSU proteome component 0.03 OrthoFinder output from all 47 species
Nbi_g03987 PGY1 component *(uL1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pir_g04954 PGY1 component *(uL1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c23_12730V3.1 Pp3c23_12730 Ribosomal protein L1p/L10e family 0.02 OrthoFinder output from all 47 species
Ppi_g34689 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12736 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Sam_g26155 No alias component *(uL1) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Smo230302 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Solyc01g009520.4.1 Solyc01g009520 component RPL10a of LSU proteome component 0.02 OrthoFinder output from all 47 species
Spa_g08347 PGY1 component *(uL1) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e019205_P001 Zm00001e019205 component RPL10a of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e022063_P001 Zm00001e022063 component RPL10a of LSU proteome component 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
InterPro domains Description Start Stop
IPR028364 Ribosomal_L1/biogenesis 21 210
No external refs found!