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  5. Tin_g40098

Tin_g40098


Description : ABC-G-type lipid transporter *(STR) & original description: none


Gene families : OG0000888 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000888_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g40098
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00181450 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
AMTR_s00060p00208620 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.07 OrthoFinder output from all 47 species
AT1G53270 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
AT2G39350 No alias ABC-2 type transporter family protein 0.03 OrthoFinder output from all 47 species
AT3G55090 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
AT3G55100 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
AT4G25750 No alias ABC-2 type transporter family protein 0.02 OrthoFinder output from all 47 species
AT5G19410 No alias ABC-2 type transporter family protein 0.04 OrthoFinder output from all 47 species
Als_g14907 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32906 WBC19, ATWBC19 ABC-G-type lipid transporter *(STR) & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g34793 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.08 OrthoFinder output from all 47 species
Dac_g38683 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g25458 WBC19, ATWBC19 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g25490 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g28101 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.08 OrthoFinder output from all 47 species
GSVIVT01014222001 No alias ABC transporter G family member 10 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01037274001 No alias Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Gb_20468 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os03g17350.1 LOC_Os03g17350 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os09g23640.1 LOC_Os09g23640 lipid transporter (STR) 0.01 OrthoFinder output from all 47 species
Len_g48614 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g50392 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.11 OrthoFinder output from all 47 species
Lfl_g26422 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
MA_103974g0010 No alias ABC transporter G family member 5 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp1g25240.1 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp2g07990.1 No alias subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Mp5g05620.1 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Mp5g15770.1 No alias subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Msp_g39182 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g43887 WBC19, ATWBC19 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g40770 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g26286 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g26296 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g32502 No alias ABC-G-type lipid transporter *(STR) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g34030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g113690.1.1 Solyc03g113690 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc09g005970.1.1 Solyc09g005970 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e001269_P001 Zm00001e001269 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species
Zm00001e019365_P001 Zm00001e019365 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e031556_P001 Zm00001e031556 subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Zm00001e036158_P002 Zm00001e036158 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 560 771
IPR003439 ABC_transporter-like_ATP-bd 90 242
No external refs found!