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  5. Tin_g40940

Tin_g40940


Description : component *(eL33) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000881 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000881_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g40940
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
Ala_g22035 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ala_g23556 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Als_g24293 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Aop_g22626 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cre10.g459250 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Dac_g01908 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Dac_g05987 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Dac_g28494 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.07 OrthoFinder output from all 47 species
Dcu_g24483 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Dcu_g31025 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01034025001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Gb_35488 No alias component RPL35a of LSU proteome component 0.03 OrthoFinder output from all 47 species
Lfl_g19455 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Lfl_g20427 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Mp1g11470.1 No alias component RPL35a of LSU proteome component 0.03 OrthoFinder output from all 47 species
Pir_g03777 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.05 OrthoFinder output from all 47 species
Sam_g24989 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Sam_g42222 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Solyc05g052800.3.1 Solyc05g052800 component RPL35a of LSU proteome component 0.03 OrthoFinder output from all 47 species
Spa_g35610 No alias component *(eL33) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
CC GO:0033573 high-affinity iron permease complex IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0051015 actin filament binding IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1905862 ferroxidase complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR001780 Ribosomal_L35A 42 135
No external refs found!