Tin_g41807 (RAP2.11)

Aliases : RAP2.11

Description : transcription factor *(ERN1) & original description: none

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Tin_g41807

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00266920	RAP2.11,...	External stimuli response.biotic...	0.04	OrthoFinder output from all 47 species
AMTR_s00016p00238800	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
AMTR_s00058p00066390	RAP2.11,...	External stimuli response.biotic...	0.02	OrthoFinder output from all 47 species
AT1G63030	ddf2	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
AT4G17500	ERF-1, ATERF-1	ethylene responsive element binding factor 1	0.02	OrthoFinder output from all 47 species
Aob_g26090	RAP2.11	transcription factor *(ERN1) & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.16G067500.1	tny, Ceric.16G067500	subgroup ERF-III transcription factor & original...	0.04	OrthoFinder output from all 47 species
Dac_g02023	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ehy_g28249	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.05	OrthoFinder output from all 47 species
Ehy_g29688	No alias	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
LOC_Os06g09790.1	ORA47, LOC_Os06g09790	Ethylene-responsive transcription factor ERF018...	0.03	OrthoFinder output from all 47 species
Lfl_g06554	DEAR1, CEJ1, ATERF#011	subgroup ERF-II transcription factor *(ERF19/20) &...	0.03	OrthoFinder output from all 47 species
Lfl_g16406	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Lfl_g30898	RAP2.12	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
MA_65877g0010	No alias	Dehydration-responsive element-binding protein 3...	0.03	OrthoFinder output from all 47 species
MA_83118g0010	No alias	transcription factor (DREB)	0.03	OrthoFinder output from all 47 species
Mp6g08690.1	TINY2	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species
Ore_g06505	RAP2.12	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Ore_g20838	RAP2.2	transcription factor component *(HRE/RAP2.12) of...	0.02	OrthoFinder output from all 47 species
Spa_g30191	No alias	subgroup ERF-I transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g42044	RAP2.11	transcription factor *(ERN1) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g52658	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
CC	GO:0005875	microtubule associated complex	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0008138	protein tyrosine/serine/threonine phosphatase activity	IEP	HCCA
BP	GO:0016311	dephosphorylation	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
CC	GO:0030286	dynein complex	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	78	127

External Links

No external refs found!

Tin_g41807 (RAP2.11)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation