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  5. Tin_g42112

Tin_g42112


Description : E3 ubiquiTin ligase & original description: none


Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g42112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00253970 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT3G06330 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Aob_g05736 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23757 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g07226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13449 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
GSVIVT01016394001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_16779 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os04g01490.1 LOC_Os04g01490 RING-v-class E3 ligase 0.04 OrthoFinder output from all 47 species
Pnu_g06087 No alias E3 ubiquitin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009961 No alias E3 ubiquitin ligase & original description: CDS=391-1818 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018968 No alias bHLH-type transcription factor & original description: CDS=1-675 0.01 OrthoFinder output from all 47 species
Solyc11g069350.2.1 Solyc11g069350 RING-v-class E3 ligase 0.01 OrthoFinder output from all 47 species
Tin_g02444 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 115 162
No external refs found!