1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g44219

Tin_g44219


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g44219
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
Adi_g034178 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035312 DOT4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g100823 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11836 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g20488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26450 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g32791 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g35870 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54765 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54909 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g63751 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aob_g14740 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g42153 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09162 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G069100.1 CRR22, Ceric.13G069100 not classified & original description: pacid=50635982... 0.03 OrthoFinder output from all 47 species
Ceric.23G020600.1 Ceric.23G020600 not classified & original description: pacid=50609730... 0.02 OrthoFinder output from all 47 species
Dac_g35459 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g40815 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42645 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06431 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21324 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g37317 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38628 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g43258 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g46395 EMB2758 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g06677 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24377 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g25114 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g12271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25855 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04822 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06187 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g19289 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g22099 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g23152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25656 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33055 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_794605g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Msp_g14080 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g17741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g22512 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28803 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g29683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18050 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g40748 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17858 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g03426 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g06978 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11385 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14457 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14507 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48319 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63652 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30607 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03245 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13232 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29087 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g30441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g48074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55046 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55202 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56584 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002433 No alias EC_2.7 transferase transferring phosphorus-containing... 0.03 OrthoFinder output from all 47 species
Sam_g24755 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo34638 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.03 OrthoFinder output from all 47 species
Smo45004 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Solyc06g053850.4.1 Solyc06g053850 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Spa_g23985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24048 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g28935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30407 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09800 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e023800_P003 PDE247, CLB19,... RNA editing factor (CLB19) 0.03 OrthoFinder output from all 47 species
Zm00001e032581_P001 Zm00001e032581 RNA editing factor (BLX) 0.02 OrthoFinder output from all 47 species
Zm00001e041694_P001 Zm00001e041694 Pentatricopeptide repeat-containing protein At5g16860... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004019 adenylosuccinate synthase activity IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 191 214
IPR002885 Pentatricopeptide_repeat 115 161
IPR002885 Pentatricopeptide_repeat 217 263
No external refs found!