Tin_g44222


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g44222

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00031p00067070 emb1899, EMB175, EMB166 Pentatricopeptide repeat-containing protein At5g03800... 0.02 OrthoFinder output from all 47 species
AMTR_s00077p00031710 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species
AMTR_s00092p00064890 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21065... 0.07 OrthoFinder output from all 47 species
Aev_g17642 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g02596 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06338 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07235 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g13814 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g15385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18239 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19042 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19078 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19219 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30627 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32003 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18957 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17592.t1 Aspi01Gene17592 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene23085.t1 Aspi01Gene23085 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene69211.t1 Aspi01Gene69211 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.05G086700.1 Ceric.05G086700 not classified & original description: pacid=50579096... 0.04 OrthoFinder output from all 47 species
Ceric.06G062800.1 Ceric.06G062800 not classified & original description: pacid=50620833... 0.02 OrthoFinder output from all 47 species
Ceric.29G083600.1 Ceric.29G083600 ssDNA-binding protein *(OSB) & original description:... 0.01 OrthoFinder output from all 47 species
Dde_g03965 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22358 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g39055 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g07385 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g07756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10855 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04310 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g14465 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g63082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g26788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 11 41
IPR002885 Pentatricopeptide_repeat 259 281
IPR002885 Pentatricopeptide_repeat 157 180
IPR002885 Pentatricopeptide_repeat 183 229
IPR002885 Pentatricopeptide_repeat 75 122
IPR002885 Pentatricopeptide_repeat 285 332
No external refs found!