Tin_g44236


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g44236

Target Alias Description ECC score Gene Family Method Actions
Adi_g034273 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12481 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05010 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37347 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21870 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g22269 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35047.t1 Aspi01Gene35047 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0003.g007914 EMB2758 not classified & original description: CDS=1-2235 0.03 OrthoFinder output from all 47 species
Azfi_s0083.g038857 No alias not classified & original description: CDS=1-2421 0.03 OrthoFinder output from all 47 species
Azfi_s0136.g050953 No alias not classified & original description: CDS=1-2220 0.03 OrthoFinder output from all 47 species
Azfi_s0896.g091565 No alias not classified & original description: CDS=1-2586 0.03 OrthoFinder output from all 47 species
Ceric.1Z254100.1 Ceric.1Z254100 not classified & original description: pacid=50632850... 0.03 OrthoFinder output from all 47 species
Dac_g18832 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04041 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12413 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g19380.1 LOC_Os01g19380 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os12g36620.1 LOC_Os12g36620 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Len_g42306 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17485 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37426 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g39841 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07674 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20095 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g20377 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17070 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53175 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003168 CRR22 not classified & original description: CDS=1-2031 0.03 OrthoFinder output from all 47 species
Sam_g01598 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g03326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26079 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g43933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g50176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo98551 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.02 OrthoFinder output from all 47 species
Spa_g06564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014549_P001 CRR22, Zm00001e014549 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 430 476
IPR002885 Pentatricopeptide_repeat 124 170
IPR002885 Pentatricopeptide_repeat 225 272
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 328 374
IPR002885 Pentatricopeptide_repeat 532 576
IPR002885 Pentatricopeptide_repeat 200 224
IPR002885 Pentatricopeptide_repeat 506 528
IPR002885 Pentatricopeptide_repeat 404 428
No external refs found!