Aliases : NFD4, HMGB4, NFD04
Description : DNA bending architectural protein *(HMG-B) & original description: none
Gene families : OG0000118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000118_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g39525 | No alias | DNA bending architectural protein *(HMG-B) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g03365 | NFD2, HMG BETA... | DNA bending architectural protein *(HMG-B) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene13239.t1 | HMGB6, Aspi01Gene13239 | DNA bending architectural protein *(HMG-B) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene22135.t1 | NFD03, HMGB3,... | DNA bending architectural protein *(HMG-B) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g10021 | NFD03, HMGB3, NFD3 | DNA bending architectural protein *(HMG-B) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g11082 | NFD03, HMGB3, NFD3 | DNA bending architectural protein *(HMG-B) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G057900.1 | NFD2, HMG BETA... | DNA bending architectural protein *(HMG-B) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Cre11.g480950 | ATHMG, HMG, SSRP1, NFD | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g13332 | NFD03, HMGB3, NFD3 | DNA bending architectural protein *(HMG-B) & original... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g47690.1 | NFD03, HMGB3,... | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Len_g16155 | NFD03, HMGB3, NFD3 | DNA bending architectural protein *(HMG-B) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g42589 | NFD4, HMGB4, NFD04 | DNA bending architectural protein *(HMG-B) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g05652 | NFD03, HMGB3, NFD3 | DNA bending architectural protein *(HMG-B) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g29699 | NFD03, HMGB3, NFD3 | DNA bending architectural protein *(HMG-B) & original... | 0.19 | OrthoFinder output from all 47 species | |
| Pir_g01738 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g61736 | No alias | DNA bending architectural protein *(HMG-B) & original... | 0.17 | OrthoFinder output from all 47 species | |
| Spa_g11610 | NFD03, HMGB3, NFD3 | DNA bending architectural protein *(HMG-B) & original... | 0.16 | OrthoFinder output from all 47 species | |
| Spa_g47228 | NFD4, HMGB4, NFD04 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004601 | peroxidase activity | IEP | HCCA |
| BP | GO:0006979 | response to oxidative stress | IEP | HCCA |
| MF | GO:0016209 | antioxidant activity | IEP | HCCA |
| MF | GO:0016684 | oxidoreductase activity, acting on peroxide as acceptor | IEP | HCCA |
| MF | GO:0042393 | histone binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR009071 | HMG_box_dom | 121 | 190 |
| No external refs found! |
