1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g44395

Tin_g44395


Description : ROP-activaTing protein *(RopGAP) & original description: none


Gene families : OG0000915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000915_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g44395
Cluster HCCA: Cluster_133

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00129680 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.02 OrthoFinder output from all 47 species
AT1G08340 No alias Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0.02 OrthoFinder output from all 47 species
AT4G03100 No alias Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0.02 OrthoFinder output from all 47 species
Aop_g05032 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25512 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11538.t1 Aspi01Gene11538 ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21330.t2 Aspi01Gene21330 ROP-activating protein *(RopGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.28G020500.1 Ceric.28G020500 ROP-activating protein *(RopGAP) & original description:... 0.06 OrthoFinder output from all 47 species
Dac_g30490 No alias ROP-activating protein *(RopGAP) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05570 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06070 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011015001 No alias Multi-process regulation.Rop GTPase regulatory... 0.04 OrthoFinder output from all 47 species
GSVIVT01033865001 No alias Multi-process regulation.Rop GTPase regulatory... 0.04 OrthoFinder output from all 47 species
GSVIVT01036109001 No alias Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
LOC_Os02g45600.1 LOC_Os02g45600 ROP-activating protein (RopGAP) 0.02 OrthoFinder output from all 47 species
LOC_Os04g48790.1 LOC_Os04g48790 ROP-activating protein (RopGAP) 0.05 OrthoFinder output from all 47 species
LOC_Os07g22580.1 LOC_Os07g22580 ROP-activating protein (RopGAP) 0.03 OrthoFinder output from all 47 species
LOC_Os11g05540.1 LOC_Os11g05540 ROP-activating protein (RopGAP) 0.02 OrthoFinder output from all 47 species
LOC_Os12g34840.1 LOC_Os12g34840 ROP-activating protein (RopGAP) 0.03 OrthoFinder output from all 47 species
Len_g06052 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39497 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436113g0010 No alias ROP-activating protein (RopGAP) 0.03 OrthoFinder output from all 47 species
MA_293369g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g06901 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08581 No alias ROP-activating protein *(RopGAP) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g25746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29250 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30150 No alias ROP-activating protein *(RopGAP) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005777 No alias ROP-activating protein *(RopGAP) & original description:... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012358 No alias ROP-activating protein *(RopGAP) & original description:... 0.02 OrthoFinder output from all 47 species
Smo13019 No alias Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
Solyc06g084450.4.1 Solyc06g084450 ROP-activating protein (RopGAP) 0.04 OrthoFinder output from all 47 species
Zm00001e018531_P001 Zm00001e018531 ROP-activating protein (RopGAP) 0.02 OrthoFinder output from all 47 species
Zm00001e033341_P001 Zm00001e033341 ROP-activating protein (RopGAP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000095 CRIB_dom 187 214
IPR000198 RhoGAP_dom 250 384
No external refs found!