Tin_g44607


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g44607

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00158010 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Adi_g098989 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g29185 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55145 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70449 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0934.g093088 No alias not classified & original description: CDS=1-1296 0.04 OrthoFinder output from all 47 species
Cba_g06233 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g16716 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29934 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g68679 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001657.6 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g36006 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g20943 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06220 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06328 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06820 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g13749 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g15421 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15845 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g22679 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g41047 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g26310 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27204 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g01662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11913 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g45297 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007597_P001 Zm00001e007597 Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 588 609
IPR002885 Pentatricopeptide_repeat 286 307
IPR002885 Pentatricopeptide_repeat 385 408
IPR002885 Pentatricopeptide_repeat 486 509
IPR002885 Pentatricopeptide_repeat 512 559
IPR002885 Pentatricopeptide_repeat 208 256
IPR002885 Pentatricopeptide_repeat 309 357
IPR002885 Pentatricopeptide_repeat 411 457
IPR002885 Pentatricopeptide_repeat 107 154
No external refs found!