Tin_g44652


Description : not classified & original description: none


Gene families : OG0000025 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g44652

Target Alias Description ECC score Gene Family Method Actions
Adi_g107429 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24295 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15006 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21329 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g27100 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene12724.t1 Aspi01Gene12724 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0084.g038986 No alias not classified & original description: CDS=1-393 0.01 OrthoFinder output from all 47 species
Cba_g04127 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29452 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29560 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G097800.1 Ceric.07G097800 not classified & original description: pacid=50626105... 0.01 OrthoFinder output from all 47 species
Dac_g00408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g24941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g49073 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g55183 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g02250 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g02492 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g19906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37585 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g42475 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002786 No alias not classified & original description: CDS=1-537 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015537 No alias not classified & original description: CDS=1-246 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0181.g024870 No alias not classified & original description: CDS=1-279 0.02 OrthoFinder output from all 47 species
Sam_g00290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g01008 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39750 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g44239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA

No InterPro domains available for this sequence

No external refs found!