Aliases : ATHB3, HB-3, ATHB-3, HAT7
Description : HD-ZIP I/II-type transcription factor & original description: none
Gene families : OG0000129 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000129_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Tin_g44726 | |
| Cluster | HCCA: Cluster_76 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00215130 | ATHB5, ATHB-5,... | RNA biosynthesis.transcriptional activation.HB... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g07423 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g13559 | ATHB13 | HD-ZIP I/II-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene39416.t1 | ATHB5, ATHB-5,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0040.g026630 | ATHB1, ATHB-1,... | HD-ZIP I/II-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s2471.g111662 | ATHB5, ATHB-5, HB5 | HD-ZIP I/II-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g08070 | ATHB3, HB-3, ATHB-3, HAT7 | HD-ZIP I/II-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g13175 | HB51, ATHB51, LMI1 | HD-ZIP I/II-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01019012001 | ATHB40, HB40, HB-5 | RNA biosynthesis.transcriptional activation.HB... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01019655001 | HB-7, ATHB-7, ATHB7 | RNA biosynthesis.transcriptional activation.HB... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os04g45810.1 | HB-7, ATHB-7,... | transcription factor (HD-ZIP I/II) | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g17855 | ATHB3, HB-3, ATHB-3, HAT7 | regulatory protein *(LMI1) of floral meristem identity... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g21633 | ATHB1, ATHB-1,... | HD-ZIP I/II-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g086930.4.1 | ATHB1, ATHB-1,... | transcription factor (HD-ZIP I/II) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc05g006980.3.1 | ATHB1, ATHB-1,... | transcription factor (HD-ZIP I/II) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015717_P003 | ATHB1, ATHB-1,... | transcription factor (HD-ZIP I/II) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | HCCA |
| MF | GO:0005048 | signal sequence binding | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006541 | glutamine metabolic process | IEP | HCCA |
| BP | GO:0006542 | glutamine biosynthetic process | IEP | HCCA |
| BP | GO:0006621 | protein retention in ER lumen | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016211 | ammonia ligase activity | IEP | HCCA |
| MF | GO:0016701 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen | IEP | HCCA |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | HCCA |
| BP | GO:0032507 | maintenance of protein location in cell | IEP | HCCA |
| MF | GO:0033218 | amide binding | IEP | HCCA |
| BP | GO:0035437 | maintenance of protein localization in endoplasmic reticulum | IEP | HCCA |
| MF | GO:0042277 | peptide binding | IEP | HCCA |
| BP | GO:0045185 | maintenance of protein location | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0046923 | ER retention sequence binding | IEP | HCCA |
| MF | GO:0051213 | dioxygenase activity | IEP | HCCA |
| BP | GO:0051235 | maintenance of location | IEP | HCCA |
| BP | GO:0051651 | maintenance of location in cell | IEP | HCCA |
| BP | GO:0072595 | maintenance of protein localization in organelle | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001356 | Homeobox_dom | 123 | 175 |
| No external refs found! |
