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  5. Tin_g45182

Tin_g45182


Description : calcium sensor *(CML) & original description: none


Gene families : OG0000383 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000383_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g45182
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00172050 CML39, CML37,... Probable calcium-binding protein CML10 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
AMTR_s00053p00122010 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML35 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g114422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35874 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43414 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43415 No alias calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g11000 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01734 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36096 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51502 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57972 No alias calcium sensor *(CML) & original description: none 0.07 OrthoFinder output from all 47 species
Aob_g00912 No alias calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g13370 No alias calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene07767.t1 Aspi01Gene07767 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene07768.t1 Aspi01Gene07768 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30068.t1 Aspi01Gene30068 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene40089.t1 Aspi01Gene40089 calcium sensor *(CML) & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene40092.t2 Aspi01Gene40092 calcium sensor *(CML) & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene67143.t1 Aspi01Gene67143 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene67147.t1 Aspi01Gene67147 calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0011.g012597 No alias calcium sensor *(CML) & original description: CDS=1-738 0.03 OrthoFinder output from all 47 species
Ceric.23G032100.1 Ceric.23G032100 calcium sensor *(CML) & original description:... 0.08 OrthoFinder output from all 47 species
Ceric.23G032400.1 TCH2, CML24,... calcium sensor *(CML) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.33G026800.1 Ceric.33G026800 calcium sensor *(CML) & original description:... 0.05 OrthoFinder output from all 47 species
Cre03.g178350 CAM3, acam-3 Calmodulin OS=Chlamydomonas reinhardtii 0.01 OrthoFinder output from all 47 species
Dac_g39853 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11523 TCH3, ATCAL4 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14735 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19027 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21209 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g27059 TCH2, CML24 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g30390 TCH2, CML24 not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01033567001 No alias Probable calcium-binding protein CML36 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os01g72080.1 LOC_Os01g72080 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os05g13580.1 LOC_Os05g13580 Probable calcium-binding protein CML18 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Len_g13533 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54649 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21495 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26952 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g30167 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10124165g0020 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
MA_1190858g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_41536g0010 No alias Probable calcium-binding protein CML25 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp5g15630.1 No alias Probable calcium-binding protein CML10 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
Msp_g08069 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20815 No alias calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g07468 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g39035 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18745 CML41 calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g38119 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19481 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g005370.3.1 Solyc01g005370 Probable calcium-binding protein CML25 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc02g091500.1.1 Solyc02g091500 Calcium-binding protein CML24 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g079755.1.1 Solyc10g079755 Probable calcium-binding protein CML36 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g10112 No alias calcium sensor *(CML) & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g14324 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27602 No alias calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e026863_P001 Zm00001e026863 Probable calcium-binding protein CML10 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Zm00001e031549_P001 Zm00001e031549 Probable calcium-binding protein CML15 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 246 313
IPR002048 EF_hand_dom 175 234
No external refs found!