Tin_g45291


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g45291

Target Alias Description ECC score Gene Family Method Actions
Ala_g28513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g05087 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06397 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19184 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g19247 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19869 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26421 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g30417 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30769 MEF21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30812 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54948 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g59722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27592 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g17754 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g00281 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g04075 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05254 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16282 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g18613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19562 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g21419 EMB2744 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29979 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35110 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35174 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g57497 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g78717 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G018200.1 OTP84, Ceric.04G018200 not classified & original description: pacid=50630783... 0.04 OrthoFinder output from all 47 species
Ceric.04G103900.1 Ceric.04G103900 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.04G106200.1 Ceric.04G106200 not classified & original description: pacid=50630879... 0.03 OrthoFinder output from all 47 species
Ceric.20G043000.1 EMB2758, Ceric.20G043000 not classified & original description: pacid=50565995... 0.04 OrthoFinder output from all 47 species
Ceric.28G027200.1 DOT4, Ceric.28G027200 not classified & original description: pacid=50570918... 0.05 OrthoFinder output from all 47 species
Ceric.31G069700.1 CRR21, Ceric.31G069700 not classified & original description: pacid=50574812... 0.04 OrthoFinder output from all 47 species
Dac_g03825 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g24501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43298 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g16086 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g28699 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18265 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03305 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14850 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g33055 DOT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04332 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28763 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g30310 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05699 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g18027 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27737 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g39306 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10372 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19959 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g08380 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13010 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g17297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g30131 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g30877 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g46864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g51837 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g52993 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53730 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g051780.3.1 Solyc03g051780 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Spa_g05221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07054 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14020 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14147 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14257 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25388 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g26791 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g48473 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53201 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22746 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26548 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e003605_P001 DOT4, Zm00001e003605 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
Zm00001e011467_P004 emb1899, EMB175,... Pentatricopeptide repeat-containing protein At5g03800... 0.02 OrthoFinder output from all 47 species
Zm00001e014825_P001 Zm00001e014825 Pentatricopeptide repeat-containing protein At2g27610... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1 34
IPR002885 Pentatricopeptide_repeat 62 93
No external refs found!