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  5. Tin_g45724

Tin_g45724 (CML43)


Aliases : CML43

Description : calcium sensor *(CML) & original description: none


Gene families : OG0000205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g45724
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00177420 CML43,... Calcium-binding protein CML42 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00121p00130840 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00316p00014990 evm_27.TU.AmTr_v1... Probable calcium-binding protein CML44 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g127489 CML43 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g10823 CML43 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06369.t1 Aspi01Gene06369 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64179.t1 CML43, Aspi01Gene64179 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0173.g055801 No alias not classified & original description: CDS=1-912 0.04 OrthoFinder output from all 47 species
Ceric.04G031000.1 CML43, Ceric.04G031000 calcium sensor *(CML) & original description:... 0.04 OrthoFinder output from all 47 species
Ehy_g11295 CML39, CML37 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g21380.2 CML42, LOC_Os03g21380 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
MA_10431324g0020 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
MA_13199g0010 CML42 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
MA_27386g0010 UNE14 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Mp6g20470.1 UNE14 Probable calcium-binding protein CML22 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
Msp_g43018 UNE14 calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g28765 CML43 calcium sensor *(CML) & original description: none 0.14 OrthoFinder output from all 47 species
Ppi_g16755 UNE14 calcium sensor *(CML) & original description: none 0.16 OrthoFinder output from all 47 species
Spa_g13776 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49929 UNE14 calcium sensor *(CML) & original description: none 0.13 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016853 isomerase activity IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 154 218
IPR002048 EF_hand_dom 247 306
No external refs found!