Aliases : LOP1, TRN1
Description : not classified & original description: none
Gene families : OG0000350 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000350_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Tin_g45781 | |
| Cluster | HCCA: Cluster_145 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Ala_g19733 | LOP1, TRN1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Als_g14110 | LOP1, TRN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g18237 | LOP1, TRN1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g26355 | LOP1, TRN1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g26356 | LOP1, TRN1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g58555 | LOP1, TRN1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene33301.t1 | LOP1, TRN1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene33304.t1 | Aspi01Gene33304 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0049.g030702 | LOP1, TRN1 | not classified & original description: CDS=40-3219 | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.18G016400.1 | Ceric.18G016400 | not classified & original description: pacid=50620952... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.18G016500.1 | Ceric.18G016500 | not classified & original description: pacid=50621773... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.20G043500.1 | LOP1, TRN1,... | not classified & original description: pacid=50566189... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g07679 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g15495 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g18756 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g20580 | LOP1, TRN1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g36702 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g40231 | LOP1, TRN1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g44747 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g10111 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g16004 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g26452 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g46964 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_41768 | LOP1, TRN1 | Protein TORNADO 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| MA_94605g0010 | LOP1, TRN1 | Protein TORNADO 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g14064 | LOP1, TRN1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g15715 | LOP1, TRN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g23036 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g38222 | LOP1, TRN1 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g41660 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g25922 | LOP1, TRN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g34586 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g07082 | LOP1, TRN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g18657 | LOP1, TRN1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g52301 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g63510 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32964 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g11065 | LOP1, TRN1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g38868 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g39802 | LOP1, TRN1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| BP | GO:0006576 | biogenic amine metabolic process | IEP | HCCA |
| BP | GO:0009308 | amine metabolic process | IEP | HCCA |
| BP | GO:0009309 | amine biosynthetic process | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0020037 | heme binding | IEP | HCCA |
| MF | GO:0030410 | nicotianamine synthase activity | IEP | HCCA |
| BP | GO:0030417 | nicotianamine metabolic process | IEP | HCCA |
| BP | GO:0030418 | nicotianamine biosynthetic process | IEP | HCCA |
| BP | GO:0042401 | biogenic amine biosynthetic process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0072350 | tricarboxylic acid metabolic process | IEP | HCCA |
| BP | GO:0072351 | tricarboxylic acid biosynthetic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
