1. Home
  2. Species
  3. Tectaria incisa
  4. Sequence
  5. Tin_g45924

Tin_g45924 (UPL7)


Aliases : UPL7

Description : E3 ubiquiTin ligase *(UPL6) & original description: none


Gene families : OG0001555 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001555_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g45924

Target Alias Description ECC score Gene Family Method Actions
Aop_g10603 UPL6 E3 ubiquitin ligase *(UPL6) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g06690.1 UPL6, LOC_Os05g06690 monomeric E3 ubiquitin ligase (HECT) 0.02 OrthoFinder output from all 47 species
Ore_g17334 UPL7 E3 ubiquitin ligase *(UPL6) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005368 UPL7 E3 ubiquitin ligase *(UPL6) & original description: CDS=254-3667 0.03 OrthoFinder output from all 47 species
Sam_g39628 No alias E3 ubiquitin ligase *(UPL6) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e031128_P003 UPL6, Zm00001e031128 monomeric E3 ubiquitin ligase (HECT) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030151 molybdenum ion binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0045048 protein insertion into ER membrane IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0051205 protein insertion into membrane IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
InterPro domains Description Start Stop
IPR000569 HECT_dom 876 1189
No external refs found!