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  5. Tin_g46255

Tin_g46255


Description : not classified & original description: none


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g46255

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00136980 OPCL1,... 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT1G20500 No alias AMP-dependent synthetase and ligase family protein 0.02 OrthoFinder output from all 47 species
AT5G38120 4CL8 AMP-dependent synthetase and ligase family protein 0.02 OrthoFinder output from all 47 species
Adi_g015908 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22282 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30549 OPCL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene63196.t1 OPCL1, Aspi01Gene63196 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63198.t1 OPCL1, Aspi01Gene63198 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s1020.g095355 No alias not classified & original description: CDS=69-1760 0.03 OrthoFinder output from all 47 species
Cba_g18797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07176 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g12985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22397 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01011541001 No alias 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_04706 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_18693 OPCL1 OPC-8:CoA synthetase 0.05 OrthoFinder output from all 47 species
Mp1g04990.1 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g09388 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04839 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g42518 OPCL1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g10312 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56806 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g111170.3.1 Solyc03g111170 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g02284 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g20791 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 420 495
IPR000873 AMP-dep_Synth/Lig_com 3 411
No external refs found!