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  5. Tin_g46489

Tin_g46489


Description : not classified & original description: none


Gene families : OG0000526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000526_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Tin_g46489

Target Alias Description ECC score Gene Family Method Actions
AT3G48940 No alias Remorin family protein 0.05 OrthoFinder output from all 47 species
Adi_g041862 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g14404 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20509 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18963 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g50861 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.11G018300.1 Ceric.11G018300 not classified & original description: pacid=50595329... 0.06 OrthoFinder output from all 47 species
Ceric.14G035300.1 Ceric.14G035300 not classified & original description: pacid=50633681... 0.04 OrthoFinder output from all 47 species
Dac_g12729 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019785001 No alias Remorin OS=Solanum tuberosum 0.06 OrthoFinder output from all 47 species
LOC_Os02g57840.2 LOC_Os02g57840 Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 92.8) 0.05 OrthoFinder output from all 47 species
LOC_Os03g02040.1 LOC_Os03g02040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g05082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g50832 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g57392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g58623 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g38113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24393 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g07447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g25809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60948 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005937 No alias not classified & original description: CDS=1-372 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019348 No alias glycine-tRNA ligase & original description: CDS=67-648 0.03 OrthoFinder output from all 47 species
Sam_g20100 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc05g048820.3.1 Solyc05g048820 Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 94.0) 0.04 OrthoFinder output from all 47 species
Spa_g00381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08097 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47427 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 66 164
No external refs found!