Msp_g01022 (HSFB4, SCZ, AT-HSFB4)

Aliases : HSFB4, SCZ, AT-HSFB4

Description : HSF-type transcription factor & original description: none

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g01022

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00095p00016160	HSFB4, SCZ,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	OrthoFinder output from all 47 species
AMTR_s00132p00118400	HSF4, HSFB1,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
AMTR_s00176p00024870	HSFA1B, ATHSF3,...	Heat stress transcription factor A-1 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
Als_g06134	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g29196	HSFA2, ATHSFA2	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g04765	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g10301	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g13990	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01002066001	AT-HSFB2A, HSFB2A	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
GSVIVT01011632001	HSFA8, AT-HSFA8	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
GSVIVT01016067001	No alias	No description available	0.02	OrthoFinder output from all 47 species
GSVIVT01022134001	HSF4, HSFB1,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
GSVIVT01033257001	AT-HSFB3, HSFB3	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	OrthoFinder output from all 47 species
GSVIVT01033781001	HSFA3, AT-HSFA3	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	OrthoFinder output from all 47 species
LOC_Os02g32590.1	HSFA3, AT-HSFA3,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
LOC_Os03g12370.1	HSFA1B, ATHSF3,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
LOC_Os05g45410.1	HSF A4A,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
MA_110587g0010	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
MA_8812600g0010	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.06	OrthoFinder output from all 47 species
Mp4g12230.1	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Pir_g62261	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g14010	No alias	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g40245	No alias	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Smo37324	ATHSF1, HSF1,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
Solyc02g072060.3.1	HSFA2, ATHSFA2,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Solyc02g079180.1.1	AT-HSFA6B,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Solyc04g016000.3.1	AT-HSFB3, HSFB3,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Solyc04g078770.4.1	HSFB4, SCZ,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Solyc09g009100.4.1	HSFA3, AT-HSFA3,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Solyc12g098520.2.1	AT-HSFA5, HSFA5,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Spa_g48007	HSFA1B, ATHSF3,...	HSF-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Zm00001e027464_P001	HSF A4A,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	22	111

External Links

No external refs found!

Msp_g01022 (HSFB4, SCZ, AT-HSFB4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation