Msp_g02338


Description : not classified & original description: none


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g02338
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00077520 evm_27.TU.AmTr_v1... Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g018199 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057412 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24118 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene64150.t1 Aspi01Gene64150 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57115 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006729 tetrahydrobiopterin biosynthetic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008124 4-alpha-hydroxytetrahydrobiopterin dehydratase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0034311 diol metabolic process IEP HCCA
BP GO:0034312 diol biosynthetic process IEP HCCA
BP GO:0042558 pteridine-containing compound metabolic process IEP HCCA
BP GO:0042559 pteridine-containing compound biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046146 tetrahydrobiopterin metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 67
No external refs found!