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  5. Msp_g02613

Msp_g02613


Description : component *(uS11) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001893 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001893_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g02613
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00104960 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
AT2G36160 No alias Ribosomal protein S11 family protein 0.03 OrthoFinder output from all 47 species
AT3G52580 No alias Ribosomal protein S11 family protein 0.02 OrthoFinder output from all 47 species
Ala_g20351 No alias component *(uS11) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0015.g013910 No alias component *(uS11) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0339.g065604 No alias component *(uS11) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001154.44 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01033877001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
GSVIVT01036096001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Gb_17067 No alias component RPS14 of SSU proteome 0.05 OrthoFinder output from all 47 species
LOC_Os02g33140.1 LOC_Os02g33140 component RPS14 of SSU proteome 0.02 OrthoFinder output from all 47 species
Mp8g10900.1 No alias component RPS14 of SSU proteome 0.03 OrthoFinder output from all 47 species
Smo183051 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder output from all 47 species
Solyc09g010100.3.1 Solyc09g010100 component RPS14 of SSU proteome 0.04 OrthoFinder output from all 47 species
Solyc10g083280.4.1 Solyc10g083280 component RPS14 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e037468_P002 Zm00001e037468 component RPS14 of SSU proteome 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0007021 tubulin complex assembly IEP HCCA
BP GO:0007023 post-chaperonin tubulin folding pathway IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
MF GO:0048487 beta-tubulin binding IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001971 Ribosomal_S11 59 177
No external refs found!