Aliases : CLPP6, NCLPP1, NCLPP6
Description : proteolytic core component *(ClpP1/3-6) of chloroplast Clp-type protease complex & original description: none
Gene families : OG0006579 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006579_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Msp_g02713 | |
| Cluster | HCCA: Cluster_17 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cba_g02386 | CLPP6, NCLPP1, NCLPP6 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07347 | CLPP6, NCLPP1, NCLPP6 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01031936001 | CLPP6, NCLPP1, NCLPP6 | Protein degradation.peptidase families.serine-type... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_39858 | CLPP6, NCLPP1, NCLPP6 | proteolytic core component ClpP1/3-6 of chloroplast... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os03g29810.1 | CLPP6, NCLPP1,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| MA_55906g0010 | CLPP6, NCLPP1, NCLPP6 | proteolytic core component ClpP1/3-6 of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g17530.1 | CLPP6, NCLPP1, NCLPP6 | proteolytic core component ClpP1/3-6 of chloroplast... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g15241 | CLPP6, NCLPP1, NCLPP6 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g16719 | CLPP6, NCLPP1, NCLPP6 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g051310.2.1 | CLPP6, NCLPP1,... | proteolytic core component ClpP1/3-6 of chloroplast... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g00289 | CLPP6, NCLPP1, NCLPP6 | proteolytic core component *(ClpP1/3-6) of chloroplast... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| BP | GO:0006520 | amino acid metabolic process | IEP | HCCA |
| BP | GO:0006528 | asparagine metabolic process | IEP | HCCA |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | HCCA |
| BP | GO:0008652 | amino acid biosynthetic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | HCCA |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | HCCA |
| CC | GO:0019867 | outer membrane | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
| BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0110102 | ribulose bisphosphate carboxylase complex assembly | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| BP | GO:1901605 | alpha-amino acid metabolic process | IEP | HCCA |
| BP | GO:1901607 | alpha-amino acid biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR023562 | ClpP/TepA | 85 | 259 |
| No external refs found! |
