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  5. Msp_g02834

Msp_g02834


Description : subgroup ERF-III transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g02834

Target Alias Description ECC score Gene Family Method Actions
AT3G16280 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g00443 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g31370 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18891 HRE2 subgroup ERF-VI transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g21431 No alias subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene07634.t1 Aspi01Gene07634 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11848.t2 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene21110.t1 DEAR2, Aspi01Gene21110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23203.t1 DREB2A, DREB2,... subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene25515.t1 DEAR1, CEJ1,... subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene44272.t1 ERF7, ATERF7,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene47254.t1 TINY2, Aspi01Gene47254 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene56620.t1 RAP2.9, DEAR5,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56622.t1 RAP2.9, DEAR5,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene62684.t2 DREB26, Aspi01Gene62684 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Azfi_s0040.g026640 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original... 0.04 OrthoFinder output from all 47 species
Azfi_s0263.g060857 LEP subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Cba_g69639 Rap2.6L subgroup ERF-X transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.11G060100.1 HRE1, Ceric.11G060100 subgroup ERF-VI transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ceric.15G043800.1 HRE2, Ceric.15G043800 transcription factor component *(HRE/RAP2.12) of... 0.06 OrthoFinder output from all 47 species
Cre14.g620500 ESR1, DRN No description available 0.02 OrthoFinder output from all 47 species
Dac_g14879 ERF110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g17233 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g23766 No alias subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42465 No alias subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01035852001 SHN3 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 OrthoFinder output from all 47 species
Gb_03645 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.03 OrthoFinder output from all 47 species
Gb_17501 HRE1 transcription factor (ERF) 0.06 OrthoFinder output from all 47 species
LOC_Os05g25260.1 ATERF3, ERF3,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_203191g0010 ATERF3, ERF3 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_425410g0010 No alias Ethylene-responsive transcription factor RAP2-13... 0.03 OrthoFinder output from all 47 species
Msp_g27431 RAP2.2 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Msp_g35612 RAP2.11 transcription factor *(ERN1) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34717 ERF72, EBP, ATEBP, RAP2.3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g09597 CRF4 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12108 CRF3 subgroup ERF-VI transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g58283 ERF110 subgroup ERF-X transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g07678 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pnu_g24749 No alias subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006104 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012398 DEAR1, CEJ1, ATERF#011 not classified & original description: CDS=1-1134 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022062 No alias subgroup ERF-VI transcription factor & original... 0.04 OrthoFinder output from all 47 species
Solyc05g013540.1.1 DRN-LIKE, ESR2,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Zm00001e029765_P001 Zm00001e029765 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 68 118
No external refs found!