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  5. Msp_g03556

Msp_g03556


Description : fucosyl transferase (FRB) involved in pectin-dependent cell adhesion & original description: none


Gene families : OG0001382 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001382_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g03556

Target Alias Description ECC score Gene Family Method Actions
AT3G54100 No alias O-fucosyltransferase family protein 0.03 OrthoFinder output from all 47 species
Ala_g20120 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Als_g45254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29968 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Aspi01Gene36078.t1 Aspi01Gene36078 fucosyl transferase (FRB) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Aspi01Gene36503.t1 Aspi01Gene36503 fucosyl transferase (FRB) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Aspi01Gene36509.t1 Aspi01Gene36509 fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Azfi_s0215.g058430 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Ceric.19G030400.1 Ceric.19G030400 fucosyl transferase (FRB) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Dac_g04707 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Dcu_g19676 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
GSVIVT01015089001 No alias O-fucosyltransferase 35 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ore_g36186 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc09g011860.4.1 Solyc09g011860 O-fucosyltransferase 19 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g56388 No alias fucosyl transferase (FRB) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008198 ferrous iron binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 221 535
No external refs found!