Msp_g03882


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g03882

Target Alias Description ECC score Gene Family Method Actions
Adi_g040866 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056922 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059315 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g128510 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g27991 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12481 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g17653 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g19430 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g28513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36200 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06887 RARE1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19076 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19077 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22321 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55080 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g41640 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g02865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03404 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35962 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0083.g038857 No alias not classified & original description: CDS=1-2421 0.03 OrthoFinder output from all 47 species
Azfi_s0408.g068470 CRR22 not classified & original description: CDS=1-1812 0.03 OrthoFinder output from all 47 species
Cba_g04039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g04696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21419 EMB2744 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34432 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07649 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20347 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20433 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21103 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23537 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25235 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g25284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g26710 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g32529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g33056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44311 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g44606 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08400 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g20520 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g06677 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g03276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25458 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26319 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26549 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33773 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g34148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06713 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g09042 OTP80 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35996 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34466 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34529 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g36833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g40180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41385 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g07843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13010 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13456 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g46816 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57531 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63506 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53937 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016681 No alias not classified & original description: CDS=1-2460 0.03 OrthoFinder output from all 47 species
Smo86032 No alias Pentatricopeptide repeat-containing protein At5g40410,... 0.03 OrthoFinder output from all 47 species
Solyc06g005690.3.1 Solyc06g005690 Pentatricopeptide repeat-containing protein At5g59600... 0.02 OrthoFinder output from all 47 species
Spa_g30211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04672 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g16670 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26628 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g27779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g39862 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032581_P001 Zm00001e032581 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 76 123
IPR002885 Pentatricopeptide_repeat 152 173
No external refs found!