Msp_g04421


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g04421

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00078040 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.02 OrthoFinder output from all 47 species
Aev_g06254 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g42810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16739 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g17143 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g07904 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g15319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30099 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23653 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23868 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g26509 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28650 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28711 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g31647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33571 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67727 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g68719 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene00921.t1 CRR2, Aspi01Gene00921 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07542.t1 Aspi01Gene07542 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08612.t1 Aspi01Gene08612 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14860.t1 Aspi01Gene14860 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58644.t1 Aspi01Gene58644 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013171 SLO1 not classified & original description: CDS=1-1446 0.05 OrthoFinder output from all 47 species
Azfi_s0069.g036571 No alias not classified & original description: CDS=1-1638 0.02 OrthoFinder output from all 47 species
Cba_g00281 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05956 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g13329 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20040 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g25304 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g58730 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g75327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75371 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.12G016200.1 Ceric.12G016200 not classified & original description: pacid=50601153... 0.08 OrthoFinder output from all 47 species
Ceric.17G073400.1 OTP86, Ceric.17G073400 not classified & original description: pacid=50617570... 0.06 OrthoFinder output from all 47 species
Ceric.19G000700.1 VAC1, ECB2,... not classified & original description: pacid=50576122... 0.05 OrthoFinder output from all 47 species
Dac_g05578 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35587 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g37938 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g38979 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36056 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g39614 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g04113 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g04350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g09168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17706 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18025 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g18295 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18522 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18533 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18591 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25604 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g30369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33765 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32586 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32947 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g39535 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41092 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g41392 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42980 No alias ssDNA-binding protein *(OSB) & original description: none 0.1 OrthoFinder output from all 47 species
Msp_g46028 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g48060 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38632 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38653 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g38771 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g41038 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g34702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g54471 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63793 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g03873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30640 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g07547 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g35865 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009200 OTP82 not classified & original description: CDS=343-1080 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019330 No alias not classified & original description: CDS=1-2295 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020628 No alias not classified & original description: CDS=1-699 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021664 No alias not classified & original description: CDS=1-1812 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0142.g022787 No alias not classified & original description: CDS=1-1491 0.05 OrthoFinder output from all 47 species
Sam_g28438 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g35656 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 303 329
IPR002885 Pentatricopeptide_repeat 124 170
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 225 273
No external refs found!