Msp_g04440


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g04440

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00170p00032020 OTP86,... Pentatricopeptide repeat-containing protein At5g16860... 0.08 OrthoFinder output from all 47 species
Adi_g003717 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Adi_g034754 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g054889 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g067897 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24404 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24747 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g25481 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36029 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36548 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g03728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30849 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g12045 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g14625 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g23626 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g01606 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g02534 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g05682 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g09260 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g11928 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g16095 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16505 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g17428 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g19954 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g23653 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23798 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g23947 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g25532 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g25552 OTP86 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g26678 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28257 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28392 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28509 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28678 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g30401 DOT4 ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g33219 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g36436 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g67578 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g67866 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67869 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g68120 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g68719 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g69963 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0410.g068507 No alias not classified & original description: CDS=1-2022 0.06 OrthoFinder output from all 47 species
Cba_g29889 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g77980 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.03G008600.1 Ceric.03G008600 not classified & original description: pacid=50571724... 0.06 OrthoFinder output from all 47 species
Ceric.07G068400.1 Ceric.07G068400 not classified & original description: pacid=50628071... 0.06 OrthoFinder output from all 47 species
Ceric.22G034400.1 Ceric.22G034400 not classified & original description: pacid=50613809... 0.05 OrthoFinder output from all 47 species
Ceric.23G013400.1 Ceric.23G013400 not classified & original description: pacid=50609831... 0.06 OrthoFinder output from all 47 species
Ceric.26G058400.1 VAC1, ECB2,... not classified & original description: pacid=50598871... 0.07 OrthoFinder output from all 47 species
Ceric.29G070600.1 Ceric.29G070600 not classified & original description: pacid=50625806... 0.05 OrthoFinder output from all 47 species
Ceric.30G017300.1 Ceric.30G017300 not classified & original description: pacid=50608904... 0.05 OrthoFinder output from all 47 species
Ceric.34G057700.1 CRR2, Ceric.34G057700 not classified & original description: pacid=50623387... 0.06 OrthoFinder output from all 47 species
Ceric.36G051900.1 Ceric.36G051900 not classified & original description: pacid=50568048... 0.06 OrthoFinder output from all 47 species
Ceric.39G028600.1 Ceric.39G028600 not classified & original description: pacid=50582938... 0.04 OrthoFinder output from all 47 species
Dac_g04996 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g05441 RARE1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g05543 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g05682 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g09096 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g11806 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g19072 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g22254 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g25049 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g30123 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g33215 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35587 REME1 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g36940 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g40077 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g41050 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g45632 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g06410 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08608 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g38644 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g19625 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22595 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24220 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g50757 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g01524 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g02904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05469 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g09438 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g12152 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17372 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g17783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18534 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19583 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g20556 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g23194 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26549 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26583 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g29951 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33287 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g34151 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g23050 OTP85 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Msp_g23085 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g41230 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41389 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g45870 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g46846 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g13386 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g14311 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g12166 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01222 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g05328 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g06693 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07437 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g10481 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g14465 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16492 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g21500 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g43570 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53936 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g54672 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g56263 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g62867 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019636 No alias not classified & original description: CDS=1-303 0.05 OrthoFinder output from all 47 species
Smo45004 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Smo76916 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Spa_g05643 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14551 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g16702 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g17936 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g20291 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g21662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23698 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g23800 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24631 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g24639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25989 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32763 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g32773 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05859 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g13479 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g17827 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g20089 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g27339 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g30250 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g35660 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g41440 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 82 129
IPR002885 Pentatricopeptide_repeat 185 231
IPR002885 Pentatricopeptide_repeat 57 81
IPR002885 Pentatricopeptide_repeat 289 319
IPR002885 Pentatricopeptide_repeat 159 184
No external refs found!