Msp_g04495


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g04495

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00175270 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g31790... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00259620 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g35030,... 0.03 OrthoFinder output from all 47 species
Aop_g32918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33111 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g36381 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g67654 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s3922.g117339 No alias not classified & original description: CDS=1-831 0.07 OrthoFinder output from all 47 species
Cre12.g483700 OSB4 Cell cycle.organelle machineries.DNA... 0.04 OrthoFinder output from all 47 species
Dac_g25154 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g42748 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g43235 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g06818 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35930 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g04332 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g17487 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g18027 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g20260 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g20492 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g22160 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g25493 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g30346 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g39284 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g03573 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06149 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07547 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09254 CRR22 not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ppi_g16330 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31283 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53025 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53554 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g53968 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc03g115790.1.1 CRR28, Solyc03g115790 Pentatricopeptide repeat-containing protein At5g66520... 0.04 OrthoFinder output from all 47 species
Solyc09g075170.1.1 Solyc09g075170 Pentatricopeptide repeat-containing protein At3g62890... 0.04 OrthoFinder output from all 47 species
Solyc09g090440.1.1 LPA66, Solyc09g090440 Pentatricopeptide repeat-containing protein At5g66520... 0.05 OrthoFinder output from all 47 species
Spa_g26887 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g08446 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g31218 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e001200_P001 Zm00001e001200 Pentatricopeptide repeat-containing protein At5g59600... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 404 425
IPR002885 Pentatricopeptide_repeat 98 123
IPR002885 Pentatricopeptide_repeat 226 272
IPR002885 Pentatricopeptide_repeat 327 375
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 124 171
No external refs found!