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  5. Msp_g04684

Msp_g04684 (AtRABA5a, RABA5a)


Aliases : AtRABA5a, RABA5a

Description : A-class RAB GTPase & original description: none


Gene families : OG0000247 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g04684

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00201210 ATRABA2A,... Vesicle trafficking.regulation of membrane tethering and... 0.03 OrthoFinder output from all 47 species
AMTR_s00108p00135260 AtRABA1f,... Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
Adi_g078038 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g078039 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g06909 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30591 RABA2b,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04921 AtRABA5a, RABA5a A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09683 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g42193 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0013.g013094 AtRABA1f, RABA1f A-class RAB GTPase & original description: CDS=414-1064 0.03 OrthoFinder output from all 47 species
Cba_g75310 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Cre03.g189250 ATRABA2A,... Vesicle trafficking.regulation of membrane tethering and... 0.01 OrthoFinder output from all 47 species
Dde_g46462 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02106 ATRABA5C, ARA4,... A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Gb_12177 AtRABA1f, RABA1f A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
LOC_Os05g01480.1 ATRABA2A,... A-class RAB GTPase 0.03 OrthoFinder output from all 47 species
LOC_Os06g35814.1 ATHSGBP, RABA1d,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species
Mp3g00730.1 ATRABA5C, ARA4,... A-class RAB GTPase 0.01 OrthoFinder output from all 47 species
Ore_g15033 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16173 AtRABA5d, RABA5d A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g16979 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011299 AtRABA1f, RABA1f A-class RAB GTPase & original description: CDS=186-836 0.02 OrthoFinder output from all 47 species
Spa_g52621 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13810 AtRABA1f, RABA1f A-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e037250_P001 ATHSGBP, RABA1d,... A-class RAB GTPase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 174
No external refs found!