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  5. Msp_g04900

Msp_g04900


Description : not classified & original description: none


Gene families : OG0001287 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001287_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g04900

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00180440 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
Ala_g01765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09321 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g09322 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g51289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g21894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02125 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G061200.1 Ceric.01G061200 not classified & original description: pacid=50591052... 0.04 OrthoFinder output from all 47 species
Ceric.01G061300.1 Ceric.01G061300 not classified & original description: pacid=50591700... 0.04 OrthoFinder output from all 47 species
Ceric.07G018800.1 Ceric.07G018800 not classified & original description: pacid=50626140... 0.04 OrthoFinder output from all 47 species
Dac_g15149 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g05360 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g25876 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g11407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009018001 No alias No description available 0.03 OrthoFinder output from all 47 species
Len_g39714 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g31085 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03420 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g03651 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010791 No alias not classified & original description: CDS=113-931 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0107.g020368 No alias not classified & original description: CDS=155-916 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021901 No alias not classified & original description: CDS=192-1037 0.05 OrthoFinder output from all 47 species
Solyc05g051970.4.1 Solyc05g051970 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g06610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001869_P001 Zm00001e001869 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e007936_P001 Zm00001e007936 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
InterPro domains Description Start Stop
IPR025131 DUF4057 3 278
No external refs found!