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  5. Msp_g04955

Msp_g04955 (ATERF3, ERF3)


Aliases : ATERF3, ERF3

Description : subgroup ERF-VIII transcription factor & original description: none


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g04955

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00069p00140780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00115p00032780 ATERF4, RAP2.5,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AT1G12610 DDF1 Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.02 OrthoFinder output from all 47 species
AT1G43160 RAP2.6 related to AP2 6 0.04 OrthoFinder output from all 47 species
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G20880 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G17500 ERF-1, ATERF-1 ethylene responsive element binding factor 1 0.03 OrthoFinder output from all 47 species
AT4G28140 No alias Integrase-type DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g018599 No alias subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Adi_g034904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g073952 tny subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g097717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g126732 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.06 OrthoFinder output from all 47 species
Aev_g02279 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g02425 AtERF48, DREB2C subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g04879 No alias subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g05911 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g09461 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aev_g10949 ERF110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12610 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.04 OrthoFinder output from all 47 species
Aev_g19208 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Aev_g21811 DEAR2 subgroup ERF-II transcription factor *(ERF19/20) &... 0.03 OrthoFinder output from all 47 species
Aev_g24731 No alias subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g26471 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g33038 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39323 CRF4 subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44036 TINY2 subgroup ERF-III transcription factor & original... 0.05 OrthoFinder output from all 47 species
Aev_g46572 DEAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g49009 ORA47 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g14492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04224 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g14120 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g20736 ATERF-9, ERF9, ATERF9 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g58152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01030 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g10334 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aop_g15011 DEAR3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38999 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04813.t1 DEAR1, CEJ1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05550.t1 Aspi01Gene05550 subgroup ERF-I transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11851.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene22167.t1 TMO3, CRF2,... subgroup ERF-VI transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34430.t1 ATERF4, RAP2.5,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47265.t1 TINY2, Aspi01Gene47265 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene57065.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene59069.t1 RAP2.2, Aspi01Gene59069 transcription factor component *(HRE/RAP2.12) of... 0.04 OrthoFinder output from all 47 species
Aspi01Gene70900.t1 Aspi01Gene70900 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20722 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26938 HRE2 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Cba_g32144 DREB26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.02G053400.1 ERF7, ATERF7,... not classified & original description: pacid=50585332... 0.04 OrthoFinder output from all 47 species
Ceric.03G067500.1 AtERF48, DREB2C,... subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.05G034500.1 DEAR2, Ceric.05G034500 not classified & original description: pacid=50578330... 0.03 OrthoFinder output from all 47 species
Ceric.07G001200.1 Ceric.07G001200 not classified & original description: pacid=50626761... 0.03 OrthoFinder output from all 47 species
Ceric.10G055400.1 Ceric.10G055400 not classified & original description: pacid=50611842... 0.03 OrthoFinder output from all 47 species
Ceric.13G039300.1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.25G020600.1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.28G035700.1 ATERF8, ATERF-8,... subgroup ERF-VIII transcription factor & original... 0.07 OrthoFinder output from all 47 species
Ceric.30G046500.1 Ceric.30G046500 not classified & original description: pacid=50609571... 0.03 OrthoFinder output from all 47 species
Ceric.30G046700.1 RAP2.1, Ceric.30G046700 not classified & original description: pacid=50607939... 0.03 OrthoFinder output from all 47 species
Ceric.34G045400.1 DREB2A, DREB2,... subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cre14.g620500 ESR1, DRN No description available 0.01 OrthoFinder output from all 47 species
Dac_g17065 DREB26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g05508 No alias subgroup ERF-VI transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g36822 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dde_g09777 DEAR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10924 ATERF-9, ERF9, ATERF9 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g01023 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g05355 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g08445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16478 No alias subgroup ERF-I transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g22214 tny subgroup ERF-III transcription factor & original... 0.07 OrthoFinder output from all 47 species
Ehy_g26298 ATERF3, ERF3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29688 No alias subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01010631001 DREB1B, ATCBF1, CBF1 Dehydration-responsive element-binding protein 1D... 0.02 OrthoFinder output from all 47 species
GSVIVT01013920001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01018270001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01018271001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01028314001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
GSVIVT01031747001 RRTF1 Alpha-amylase type B isozyme OS=Hordeum vulgare 0.03 OrthoFinder output from all 47 species
Gb_01216 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_07476 ERF-6-6, ERF6, ATERF6 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Gb_17210 IDD16, AtIDD16 transcription factor (DREB). C2H2 zinc finger... 0.04 OrthoFinder output from all 47 species
Gb_17212 DREB2B, DREB2 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_34285 HRD transcription factor (DREB) 0.05 OrthoFinder output from all 47 species
LOC_Os01g54890.1 ERF-1, ATERF-1,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os03g22170.1 HRE2, LOC_Os03g22170 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os04g52090.1 ATERF-9, ERF9,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os05g28350.1 ABI4, SAN5,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os05g41780.1 ATERF-9, ERF9,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os05g49700.1 LOC_Os05g49700 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
LOC_Os06g03670.1 DREB1A, ATCBF3,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os07g12510.1 ERF110, LOC_Os07g12510 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os08g36920.1 RRTF1, LOC_Os08g36920 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
LOC_Os10g41330.1 ERF-6-6, ERF6,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
LOC_Os11g06770.2 ERF110, LOC_Os11g06770 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Len_g35061 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Len_g48769 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01837 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.04 OrthoFinder output from all 47 species
Lfl_g04609 ORA47 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_100577g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_100724g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_10082062g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_10242823g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_10370681g0010 ORA47 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_10430850g0010 No alias transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
MA_10436654g0010 ORA47 Ethylene-responsive transcription factor ERF018... 0.02 OrthoFinder output from all 47 species
MA_12171g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_134453g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_164803g0010 tny transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_16778g0010 DREB2A, DREB2 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
MA_2128446g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_500288g0010 ABI4, SAN5,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_7168929g0010 No alias Ethylene-responsive transcription factor ERF016... 0.02 OrthoFinder output from all 47 species
MA_81029g0010 ATERF4, RAP2.5,... transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
MA_82481g0010 HRD transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_9260020g0010 SHN3 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_959784g0010 No alias transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
MA_9785986g0010 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Mp1g20040.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Mp6g08690.1 TINY2 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Ore_g03958 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g06333 TINY2 subgroup ERF-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pir_g40777 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49340 DREB2B, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g60485 ATERF11, ERF11 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Pnu_g02011 DEAR4, RAP2.10 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.02 OrthoFinder output from all 47 species
Pnu_g15298 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc01g108240.3.1 RRTF1, Solyc01g108240 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc02g090770.1.1 ERF110, Solyc02g090770 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc03g093550.1.1 Solyc03g093550 transcription factor (ERF) 0.05 OrthoFinder output from all 47 species
Solyc04g072300.1.1 Solyc04g072300 Ethylene-responsive transcription factor FZP OS=Oryza... 0.02 OrthoFinder output from all 47 species
Solyc05g052030.1.1 Solyc05g052030 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc06g054630.3.1 Solyc06g054630 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc06g068360.3.1 Solyc06g068360 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc06g082590.1.1 CRF4, Solyc06g082590 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Solyc08g007820.1.1 CBF4, DREB1D,... transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc08g007830.1.1 DDF1, Solyc08g007830 Dehydration-responsive element-binding protein 1F... 0.02 OrthoFinder output from all 47 species
Solyc10g050970.1.1 RRTF1, Solyc10g050970 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Solyc12g009240.1.1 Solyc12g009240 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Spa_g04960 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g05270 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g05271 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16569 CRF3 subgroup ERF-VI transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24172 DEAR3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46619 ATERF8, ATERF-8, ERF8 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Spa_g46620 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.04 OrthoFinder output from all 47 species
Tin_g06979 DREB26 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e022864_P001 ESR1, DRN, Zm00001e022864 transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e024669_P001 ERF110, Zm00001e024669 transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Zm00001e026192_P001 HRE2, Zm00001e026192 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e027351_P001 ATERF4, RAP2.5,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e031438_P002 HRE2, Zm00001e031438 Ethylene-responsive transcription factor RAP2-3... 0.03 OrthoFinder output from all 47 species
Zm00001e032032_P001 ATERF12, ERF12,... transcription factor (ERF) 0.02 OrthoFinder output from all 47 species
Zm00001e033790_P001 Zm00001e033790 transcription factor (ERF) 0.03 OrthoFinder output from all 47 species
Zm00001e038525_P001 DREB26, Zm00001e038525 Ethylene-responsive transcription factor ERF013... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 41 91
No external refs found!