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  5. Msp_g05081

Msp_g05081 (AGL65)


Aliases : AGL65

Description : MADS/AGL-type transcription factor & original description: none


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g05081

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00262760 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g06477 AGL16 MADS/AGL-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene12152.t1 AGL42, Aspi01Gene12152 MADS/AGL-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene15825.t1 SHP2, AGL5,... MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17777.t1 SHP2, AGL5,... MADS/AGL-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g02413 AGL16 MADS/AGL-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g07446 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_12669g0010 AGL1, SHP1 transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Nbi_g24288 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08456 AGL21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41504 SHP2, AGL5 MADS/AGL-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Solyc02g089200.4.1 AGL2, SEP1,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Solyc05g015750.3.1 AGL9, SEP3,... transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!