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  5. Msp_g05111

Msp_g05111


Description : not classified & original description: none


Gene families : OG0000091 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000091_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g05111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00054880 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00022p00043220 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00042010 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00042470 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Aev_g10917 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g11436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g26744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g38972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38973 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30640 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g41190 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36259 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01054.t1 Aspi01Gene01054 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene36874.t1 Aspi01Gene36874 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.14G027400.1 Ceric.14G027400 not classified & original description: pacid=50633616... 0.03 OrthoFinder output from all 47 species
Ceric.14G096600.1 Ceric.14G096600 not classified & original description: pacid=50634393... 0.06 OrthoFinder output from all 47 species
Ceric.14G097000.1 Ceric.14G097000 not classified & original description: pacid=50633954... 0.06 OrthoFinder output from all 47 species
Ceric.14G097100.1 Ceric.14G097100 not classified & original description: pacid=50633776... 0.04 OrthoFinder output from all 47 species
Ceric.14G097200.1 Ceric.14G097200 not classified & original description: pacid=50634613... 0.06 OrthoFinder output from all 47 species
Ceric.16G032900.1 Ceric.16G032900 not classified & original description: pacid=50589857... 0.03 OrthoFinder output from all 47 species
Ceric.26G065000.1 Ceric.26G065000 not classified & original description: pacid=50598973... 0.04 OrthoFinder output from all 47 species
Dac_g05506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07675 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43546 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03872 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19106 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21830 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31299 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01028106001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_35305 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_41646 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g19880.1 LOC_Os01g19880 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g09980.1 LOC_Os02g09980 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g09990.1 LOC_Os02g09990 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g47960.1 LOC_Os05g47960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g03117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04739 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g27677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_112931g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_21964g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_59045g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_87298g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp3g03220.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g18590.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g29597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g24927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26362 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g31192 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17254 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g65920 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g091180.1.1 Solyc02g091180 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc04g007580.1.1 Solyc04g007580 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc04g082960.1.1 Solyc04g082960 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g06542 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g11256 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g40331 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g15446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g36095 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e013167_P001 Zm00001e013167 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e020136_P001 Zm00001e020136 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e026461_P001 Zm00001e026461 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e034558_P001 Zm00001e034558 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e034559_P001 Zm00001e034559 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e038350_P001 Zm00001e038350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e042459_P001 Zm00001e042459 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025322 PADRE_dom 59 268
No external refs found!