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  5. Msp_g05287

Msp_g05287 (GATA22, CGA1, GNL)


Aliases : GATA22, CGA1, GNL

Description : transcription factor *(A/B-GATA) & original description: none


Gene families : OG0000100 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000100_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g05287

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00064p00107710 GATA22, CGA1,... RNA biosynthesis.transcriptional activation.C2C2... 0.05 OrthoFinder output from all 47 species
Adi_g010084 GATA22, CGA1, GNL not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01872 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g02176 GNC, GATA21 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05872 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os05g49280.1 GATA20, LOC_Os05g49280 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Len_g13378 GATA15 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g03090 GATA15 transcription factor *(A/B-GATA) & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g27263 GATA17 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02879 GATA15 transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g06827 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06828 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g17136 GATA22, CGA1, GNL transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0128.g021913 GATA15 transcription factor *(A/B-GATA) & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g08124 No alias transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39003 No alias transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20099 GATA15 transcription factor *(A/B-GATA) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032219_P001 GATA12, Zm00001e032219 transcription factor (GATA) 0.02 OrthoFinder output from all 47 species
Zm00001e037876_P002 GATA4, Zm00001e037876 transcription factor (GATA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR000679 Znf_GATA 261 294
No external refs found!