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  5. Msp_g06114

Msp_g06114


Description : regulatory protein (CIB) of blue light perception & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g06114

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00267570 UNE12,... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AMTR_s00025p00087300 LRL2,... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AT1G59640 BPEp, ZCW32, BPE, BPEub BIG PETAL P 0.03 OrthoFinder output from all 47 species
AT2G43140 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
AT2G46970 PIL1 phytochrome interacting factor 3-like 1 0.02 OrthoFinder output from all 47 species
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G28790 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g088431 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ala_g26152 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g01540 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g09007 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g30860 LRL3 bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Als_g49595 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31617 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aop_g15698 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aop_g21701 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aop_g21794 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Aop_g38923 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Azfi_s0038.g026209 No alias bHLH-type transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Azfi_s0056.g034059 RHD6 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g01170 HEC3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15079 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Cba_g15803 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ceric.11G032200.1 Ceric.11G032200 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ceric.14G055200.1 RSL2, Ceric.14G055200 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.16G014000.1 RHD6, Ceric.16G014000 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G088200.1 RHD6, Ceric.20G088200 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g31685 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Ehy_g05767 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ehy_g05791 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
LOC_Os01g02110.1 RHD6, LOC_Os01g02110 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os01g51140.1 LOC_Os01g51140 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os06g41060.1 LOC_Os06g41060 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_10156436g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_105921g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Ore_g12865 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19414 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g31547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13956 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g21397 RSL4 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27016 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c3_8460V3.1 RSL2, Pp3c3_8460 ROOT HAIR DEFECTIVE 6-LIKE 2 0.01 OrthoFinder output from all 47 species
Ppi_g02227 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33350 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000117 LRL3 bHLH-type transcription factor & original description: CDS=18-674 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0082.g018070 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Sam_g43944 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Solyc04g007300.4.1 BEE3, Solyc04g007300 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc04g077960.1.1 RSL2, Solyc04g077960 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Spa_g05058 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Spa_g33531 RHD6 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003624_P003 Zm00001e003624 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e009823_P002 LRL1, Zm00001e009823 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e010540_P001 Zm00001e010540 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e011084_P002 Zm00001e011084 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e012110_P003 Zm00001e012110 transcription factor (bHLH). transcriptional regulator (CIB) 0.01 OrthoFinder output from all 47 species
Zm00001e018857_P002 Zm00001e018857 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e028489_P003 Zm00001e028489 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e030725_P001 Zm00001e030725 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e034446_P001 CIB5, Zm00001e034446 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e034658_P003 Zm00001e034658 transcription factor (bHLH). transcriptional regulator (CIB) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 416 463
No external refs found!