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  5. Msp_g06131

Msp_g06131


Description : not classified & original description: none


Gene families : OG0001845 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001845_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g06131
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00109000 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00092p00074340 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G67590 No alias Remorin family protein 0.07 OrthoFinder output from all 47 species
Ala_g26838 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g28539 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g08170 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21433 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05715 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g02817 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g15655 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g41400 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g12713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_05550 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g03148 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_173856g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g28990.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp2g17160.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g06710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08078 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g25310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0178.g024675 No alias not classified & original description: CDS=2620-4236 0.02 OrthoFinder output from all 47 species
Tin_g02068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g27482 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e022735_P001 Zm00001e022735 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 423 526
No external refs found!