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  5. Msp_g06825

Msp_g06825 (ATHDA15, HDA15)


Aliases : ATHDA15, HDA15

Description : class-II histone deacetylase & original description: none


Gene families : OG0001559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g06825

Target Alias Description ECC score Gene Family Method Actions
AT5G61060 ATHDA5, HDA05, HDA5 histone deacetylase 5 0.03 OrthoFinder output from all 47 species
Ceric.02G070600.1 ATHDA15, HDA15,... class-II histone deacetylase & original description:... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008897 holo-[acyl-carrier-protein] synthase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0043167 ion binding IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 232 520
No external refs found!