Msp_g07434


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g07434

Target Alias Description ECC score Gene Family Method Actions
AT1G17630 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G36980 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G32430 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.01 OrthoFinder output from all 47 species
Aev_g37465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25536 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g25552 OTP86 not classified & original description: none 0.17 OrthoFinder output from all 47 species
Aspi01Gene08600.t1 Aspi01Gene08600 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene10966.t1 Aspi01Gene10966 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21022.t1 Aspi01Gene21022 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001409 No alias not classified & original description: CDS=1-2469 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008304 OTP84 not classified & original description: CDS=1-2247 0.02 OrthoFinder output from all 47 species
Azfi_s0039.g026450 No alias not classified & original description: CDS=1-3138 0.03 OrthoFinder output from all 47 species
Azfi_s0084.g039082 No alias not classified & original description: CDS=1-2637 0.02 OrthoFinder output from all 47 species
Azfi_s0117.g046522 No alias not classified & original description: CDS=125-2725 0.02 OrthoFinder output from all 47 species
Azfi_s0268.g061096 No alias not classified & original description: CDS=119-2467 0.02 OrthoFinder output from all 47 species
Cba_g05190 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05980 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g10890 CRR22 not classified & original description: none 0.08 OrthoFinder output from all 47 species
Cba_g11618 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25477 EMB2758 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g30006 CRR22 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g35120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g66427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g05872 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g27049 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35356 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g41120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04851 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18063 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18169 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22168 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23588 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g25432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26380 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28151 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47805 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g44480.1 LOC_Os02g44480 Pentatricopeptide repeat-containing protein At5g39350... 0.09 OrthoFinder output from all 47 species
LOC_Os07g47370.1 LOC_Os07g47370 Pentatricopeptide repeat-containing protein At4g32430,... 0.07 OrthoFinder output from all 47 species
Lfl_g11093 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g39832 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g22164 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g04351 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g05957 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Pir_g15751 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35599 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07617 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g29373 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38015 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g38690 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04171 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g12305 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26633 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g29955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g36263 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 122 169
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 97 119
IPR002885 Pentatricopeptide_repeat 199 221
No external refs found!