Msp_g07920 (ATCDSP32, CDSP32)


Aliases : ATCDSP32, CDSP32

Description : plastidial thioredoxin *(TrxL1) & original description: none


Gene families : OG0006806 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006806_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g07920
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00147850 ATCDSP32,... Thioredoxin-like protein CDSP32, chloroplastic... 0.06 OrthoFinder output from all 47 species
Adi_g078630 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g11787 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22724 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15470 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12372 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05707.t1 ATCDSP32,... plastidial thioredoxin *(TrxL1) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0048.g030407 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description:... 0.02 OrthoFinder output from all 47 species
Cba_g22593 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.35G049800.1 ATCDSP32,... plastidial thioredoxin *(TrxL1) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g15918 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g00891 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g21447 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g05756 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.07 OrthoFinder output from all 47 species
Len_g23803 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g09446 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19186 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g07440 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g04933 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g10153 ATCDSP32, CDSP32 plastidial thioredoxin *(TrxL1) & original description: none 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0009916 alternative oxidase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 102 196
IPR013766 Thioredoxin_domain 217 313
No external refs found!