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  5. Msp_g07925

Msp_g07925


Description : not classified & original description: none


Gene families : OG0006152 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006152_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Msp_g07925
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AT1G12250 No alias Pentapeptide repeat-containing protein 0.04 OrthoFinder output from all 47 species
Adi_g015162 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08842 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g02920 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g58664 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Cre17.g721700 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.07 OrthoFinder output from all 47 species
Dac_g13925 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g06102 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Dde_g11753 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g04356 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01001267001 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.07 OrthoFinder output from all 47 species
Gb_01023 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.07 OrthoFinder output from all 47 species
LOC_Os02g42960.1 LOC_Os02g42960 Thylakoid lumenal protein TL20.3, chloroplastic... 0.05 OrthoFinder output from all 47 species
Len_g28816 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Mp8g12430.1 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.07 OrthoFinder output from all 47 species
Nbi_g05641 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g18142 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pp3c21_17930V3.1 Pp3c21_17930 Pentapeptide repeat-containing protein 0.02 OrthoFinder output from all 47 species
Ppi_g16845 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001784 No alias not classified & original description: CDS=1-996 0.04 OrthoFinder output from all 47 species
Sam_g15961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo96317 No alias Thylakoid lumenal protein TL20.3, chloroplastic... 0.04 OrthoFinder output from all 47 species
Solyc08g079110.4.1 Solyc08g079110 Thylakoid lumenal protein TL20.3, chloroplastic... 0.03 OrthoFinder output from all 47 species
Spa_g08899 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g18697 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Tin_g10553 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
InterPro domains Description Start Stop
IPR001646 5peptide_repeat 178 213
IPR001646 5peptide_repeat 136 172
No external refs found!