Msp_g08271 (RPT1A)

Aliases : RPT1A

Description : regulatory component *(RPT1) of 26S proteasome & original description: none

Gene families : OG0004346 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004346_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Msp_g08271

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021464.16	RPT1A	Protein degradation.26S proteasome.regulatory...	0.03	OrthoFinder output from all 47 species
GSVIVT01016655001	RPT1A	Protein degradation.26S proteasome.regulatory...	0.03	OrthoFinder output from all 47 species
LOC_Os06g09290.2	RPT1A, LOC_Os06g09290	regulatory component RPT1 of 26S proteasome	0.03	OrthoFinder output from all 47 species
Mp2g04840.1	RPT1A	regulatory component RPT1 of 26S proteasome	0.02	OrthoFinder output from all 47 species
Pp3c20_1430V3.1	RPT1A, Pp3c20_1430	regulatory particle triple-A 1A	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0020.g008081	RPT1A	regulatory component *(RPT1) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Smo146742	RPT1A	Protein degradation.26S proteasome.regulatory...	0.03	OrthoFinder output from all 47 species
Spa_g06127	RPT1A	regulatory component *(RPT1) of 26S proteasome &...	0.02	OrthoFinder output from all 47 species
Zm00001e016066_P001	RPT1A, Zm00001e016066	regulatory component RPT1 of 26S proteasome	0.03	OrthoFinder output from all 47 species
Zm00001e023743_P001	RPT1A, Zm00001e023743	regulatory component RPT1 of 26S proteasome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016740	transferase activity	IEP	HCCA
MF	GO:0016746	acyltransferase activity	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003959	ATPase_AAA_core	204	336
IPR041569	AAA_lid_3	359	403

External Links

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